Event Calendar:

February 2012
	Mo	Tu	We	Th	Fr	Sa	Su
5	30	31	1	2	3	4	5
6	6	7	8	9	10	11	12
7	13	14	15	16	17	18	19
8	20	21	22	23	24	25	26
9	27	28	29	1	2	3	4

» All Events

Quick Links

Contact

Michael Habeck

Address:	Spemannstr. 38 72076 Tübingen
Room number:	224
Phone:	+49 7071 601 451
Fax:	+49 7071 601 552
E-Mail:	michael.habeck

Michael Habeck

Position: Senior Research Scientist Unit: Schölkopf

Publications

Articles (33):
•	Armache J-P , Jarasch A , Anger AM , Villa E , Becker T , Bhushan S , Jossinet F , Habeck M , Dindar G , Franckenberg S , Marquez V , Mielke T , Thomm M , Berninghausen O , Beatrix B , Söding J , Westhof E , Wilson DN and Beckmann R (November-2011) Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome Proceedings of the National Academy of Sciences of the United States of America 107(46) 19754-19759.
•	Armache J-P , Jarasch A , Anger AM , Villa E , Becker T , Bhushan S , Jossinet F , Habeck M , Dindar G , Franckenberg S , Marquez V , Mielke T , Thomm M , Berninghausen O , Beatrix B , Söding J , Westhof E , Wilson DN and Beckmann R (October-2011) Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-Å resolution Proceedings of the National Academy of Sciences of the United States of America 107(46) 19748-19753.
•	Hirsch M , Schölkopf B and Habeck M (March-2011) A Blind Deconvolution Approach for Improving the Resolution of Cryo-EM Density Maps Journal of Computational Biology 18(3) 335-346.
•	Habeck M and Nilges M (March-2011) Combining computational modeling with sparse and low-resolution data Journal of Structural Biology 173(3) 419.
•	Habeck M (March-2011) Statistical mechanics analysis of sparse data Journal of Structural Biology 173(3) 541-548.
•	Mechelke M and Habeck M (July-2010) Robust probabilistic superposition and comparison of protein structures BMC Bioinformatics 11(363) 1-13.
•	Habeck M (December-2009) Generation of three-dimensional random rotations in fitting and matching problems Computational Statistics 24(4) 719-731.
•	Alva V , Dunin-Horkawicz S , Habeck M , Coles M and Lupas AN (July-2009) The GD box: A widespread non-contiguous supersecondary structural element Protein Science 18(9) 1961-1966.
•	Djuranovic S , Hartmann MD , Habeck M , Ursinus A , Zwickl P , Martin J , Lupas AN and Zeth K (June-2009) Structure and Activity of the N-Terminal Substrate Recognition Domains in Proteasomal ATPases Molecular Cell 34(5) 580-590.
•	Bardiaux B , Bernard A , Rieping W , Habeck M , Malliavin TE and Nilges M (May-2009) Influence of Different Assignment Conditions on the Determination of Symmetric Homo-dimeric Structures with ARIA Proteins 75(3) 569-585.
•	Hirsch M and Habeck M (October-2008) Mixture Models for Protein Structure Ensembles Bioinformatics 24(19) 2184-2192.
•	Bayrhuber M , Meins T , Habeck M , Becker S , Giller K , Villinger S , Vonrhein C , Griesinger C , Zweckstetter M and Zeth K (October-2008) Structure of the human voltage-dependent anion channel Proceedings of the National Academy of Sciences of the United States of America 105(40) 15370-15375.
•	Nilges M , Bernard A , Bardiaux B , Malliavin T , Habeck M and Rieping W (September-2008) Accurate NMR Structures Through Minimization of an Extended Hybrid Energy Structure 16(9) 1305-1312.
•	Bardiaux B , Bernard A , Rieping W , Habeck M , Malliavin T and Nilges M (June-2008) Graphical Analysis of NMR Structural Quality and Interactive Contact Map of NOE Assignments in ARIA BMC Structural Biology 8(30) 1-5.
•	Habeck M , Nilges M and Rieping W (February-2008) A Unifying Probabilistic Framework for Analyzing Residual Dipolar Couplings Journal of Biomolecular NMR 40(2) 135-144.
•	Wolff N , Izadi-Pruneyre N , Scholes J , Habeck M , Linge J , Rieping W , Wandersman C , Nilges M , Delepierre M and Lecroisey A (February-2008) Comparative Analysis of Structural and Dynamic Properties of the Loaded and Unloaded Hemophore HasA: Functional Implications Journal of Molecular Biology 376(2) 517-525.
•	Rieping W , Nilges M and Habeck M (February-2008) ISD: A Software Package for Bayesian NMR Structure Calculation Bioinformatics 24(8) 1104-1105.
•	Nilges M , Habeck M and Rieping W (February-2008) Probabilistic Structure Calculation Comptes Rendus Chimie 11(4-5) 356-369.
•	Habeck M (May-2007) Bayesian Reconstruction of the Density of States Physical Review Letters 98(20, 200601) 1-4.
•	Rieping W , Habeck M , Bardiaux B , Bernard A , Malliavin TE and Nilges M (February-2007) ARIA2: automated NOE assignment and data integration in NMR structure calculation Bioinformatics 23(3) 381-382.
•	Nicastro G , Habeck M , Masino L , Svergun DI and Pastore A (December-2006) Structure validation of the Josephin domain of ataxin-3: Conclusive evidence for an open conformation Journal of Biomolecular NMR 36(4) 267-277.
•	AB E , Atkinson A , Banci L , Bertini I , Ciofi-Baffoni S , Brunner K , Diercks T , Dotsch V , Engelke F , Folkers GE , Griesinger C , Gronwald W , Gunther U , Habeck M , de Jong RN , Kalbitzer HR , Kieffer B , Leeflang BR , Loss S , Luchinat C and Marquardsen T (October-2006) NMR in the SPINE Structural Proteomics project Acta Crystallographica D: Biological Crystallography 62(10) 1150-1161.
•	Nilges M , Habeck M , Zdravković Si and Rieping W (July-2006) Error distribution derived NOE distance restraints Proteins 64(3) 652-664.
•	Habeck M , Rieping W and Nilges M (February-2006) Weighting of experimental evidence in macromolecular structure determination Proceedings of the National Academy of Sciences of the United States of America 103(6) 1756-1761.
•	Rieping W , Habeck M and Nilges M (November-23-2005) Modeling Errors in NOE Data with a Log-normal Distribution Improves the Quality of NMR Structures J. Am. Chem. Soc. 127 16026-16027.
•	Habeck M , Rieping W and Nilges M (November-2005) Bayesian estimation of Karplus parameters and torsion angles from three-bond scalar couplings constants Journal of Magnetic Resonance 177(1) 160-165.
•	Habeck M , Nilges M and Rieping W (September-2005) Bayesian inference applied to macromolecular structure determination Physical Review E 72(3,1) 031912-031912.
•	Rieping W , Habeck M and Nilges M (July-8-2005) Inferential structure determination. Science 309 303.
•	Habeck M , Nilges M and Rieping W (January-14-2005) Replica-exchange Monte Carlo scheme for bayesian data analysis. Phys Rev Lett. 94 018105-018105.
•	Linge JP , Habeck M , Rieping W and Nilges M (April-2004) Correction of spin diffusion during iterative automated NOE assignment. J Magn Reson. 167 334.
•	Linge JP , Habeck M , Rieping W and Nilges M (January-2004) ARIA: automated NOE assignment and NMR structure calculation. Bioinformatics 19 315.
•	Fogh R , Ionides J , Ulrich E , Boucher W , Vranken W , Linge JP , Habeck M , Rieping W , Bhat TN , Westbrook J , Hendrik K , Gilliland G , Berman H , Thornton J , Nilges M , Markley J and Laue E (June-2002) The CCPN project: an interim report on a data model for the NMR community. Nat Struct Biol. 9 416.
•	Muhle-Goll C , Habeck M , Carzola O , Nilges M , Labeit S and Granzier H (October-2001) Structural and functional studies of titin‘s fn3 modules reveal conserved surface patterns and binding to myosin S1--a possible role in the Frank-Starling mechanism of the heart. J Mol Biol. 313 431.
Conference papers (6):
•	Langovoy M , Habeck M and Schölkopf B (August-2011) Adaptive nonparametric detection in cryo-electron microscopy 58th World Statistics Congress of the International Statistical Institute (ISI 2011), 1-6.
•	Langovoy M , Habeck M and Schölkopf B (August-2011) Spatial statistics, image analysis and percolation theory 2011 Joint Statistical Meetings (JSM), American Statistical Association, Alexandria, VA, USA, 1-11.
•	Hirsch M , Schölkopf B and Habeck M (May-2010) A New Algorithm for Improving the Resolution of Cryo-EM Density Maps In: Research in Computational Molecular Biology, 14th International Conference on Research in Computational Molecular Biology (RECOMB 2010), Springer, Berlin, Germany, 174-188.
•	Habeck M , Rieping W and Nilges M (October-2004) Estimation of proton configurations from NOESY spectra 24th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering, American Institute of Physics, Melville, New York, 119-126.
•	Rieping W , Habeck M and Nilges M (October-2004) Structure determination from heterogeneous NMR data 24th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering, American Institute of Physics, Melville, New York, 268-275.
•	Habeck M , Rieping W and Nilges M (April-2004) A new principle for macromolecular structure determination 23rd International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering, American Institute of Physics, Melville, 157-166.
Contributions to books (3):
•	Nilges M , Markwick P , Malliavin TE , Rieping W and Habeck M : New Frontiers in Characterizing Structure and Dynamics by NMR, 655-680. In: Computational Structural Biology: Methods and Applications, (Ed) T. Schwede, World Scientific, New Jersey, NJ, USA, (May-2008).
•	Rieping W , Habeck M and Nilges M : Probabilistic Structure Calculation, 81-98. In: Structure and Biophysics: New Technologies for Current Challenges in Biology and Beyond, (Ed) J. D. Puglisi, Springer Netherlands, Berlin, Germany, (March-2007).
•	Habeck M , Rieping W , Linge JP and Nilges M : NOE assignment with ARIA 2.0: the nuts and bolts., 379-402. In: Protein NMR Techniques, , Humana Press, Totowa, NJ 07512, USA, (August-2004).
Theses (1):
•	Habeck M : Rekonstruktion von Proteinstrukturen aus unvollständigen NMR-Daten, Universitaet Regensburg, Germany, (December-2004). PhD thesis
Talks (7):
•	Langovoy M , Habeck M and Schölkopf B (August-2011): Statistical Image Analysis and Percolation Theory, 2011 Joint Statistical Meetings (JSM), Miami Beach, FL, USA.
•	Habeck M (April-2008): Bayesian methods for protein structure determination, Machine Learning in Structural Bioinformatics.
•	Habeck M (September-2007): Bayesian methods for NMR structure determination, 29th Annual Discussion Meeting: Magnetic Resonance in Biophysical Chemistry, Göttingen, Germany.
•	Habeck M (September-2006): Inferential Structure Determination: Probabilistic determination and validation of NMR structures, Gordon Research Conference on Computational Aspects of Biomolecular NMR, Aussois, France.
•	Habeck M (July-2006): Inferential structure determination: Overview and new developments, Sixth CCPN Annual Conference: Efficient and Rapid Structure Determination by NMR, Ambleside, UK.
•	Rieping W and Habeck M (August-2004): Inferential Structure Determination, Fourth CCPN Annual Conference: Efficient and Rapid Structure Determination by NMR, Ambleside, UK.
•	Habeck M (July-2004): Estimation of proton configurations from NOESY spectra, 24th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering, Garching bei München, Germany.